objectvar save_window_, rvp_ objectvar scene_vector_[5] objectvar ocbox_, ocbox_list_, scene_, scene_list_ {ocbox_list_ = new List() scene_list_ = new List()} {pwman_place(6,0)} { xpanel("NEURON Main Panel", 0) xcheckbox("Quiet",&stdrun_quiet,"") realtime = 46 xvalue("Real Time","realtime", 0,"", 0, 1 ) celsius = 6.3 xvalue("celsius","celsius", 1,"", 0, 1 ) global_ra = 110 xvalue("global_Ra","global_ra", 1,"set_ra()", 1, 1 ) xbutton("RunControl","nrncontrolmenu()") xmenu("New Graph") xbutton("Voltage axis","newPlotV()") xbutton("Current axis","newPlotI()") xbutton("State axis","newPlotS()") xbutton("Shape plot","newshapeplot()") xbutton("Vector movie","newvectorplot()") xbutton("Phase Plane","newphaseplane()") xbutton("Grapher","load_proc(\"makegrapher\") makegrapher()") xmenu() xmenu("Point Processes") xmenu("Managers") xbutton("Point Manager","load_template(\"PointProcessManager\") makeppm()") xbutton("Point Group","load_template(\"PointProcessGroupManager\") makeppgm()") xbutton("Electrode","load_proc(\"makeelectrode\") makeelectrode()") xmenu() xmenu("Viewers") xmenu("PointProcesses") xbutton("IClamp","makePointBrowser(\"IClamp\")") xbutton("AlphaSynapse","makePointBrowser(\"AlphaSynapse\")") xbutton("TrigKSyn","makePointBrowser(\"TrigKSyn\")") xbutton("SEClamp","makePointBrowser(\"SEClamp\")") xbutton("VClamp","makePointBrowser(\"VClamp\")") xbutton("APCount","makePointBrowser(\"APCount\")") xbutton("ribbon_2r","makePointBrowser(\"ribbon_2r\")") xbutton("GLUdAMPA_R","makePointBrowser(\"GLUdAMPA_R\")") xbutton("OnBipolar","makePointBrowser(\"OnBipolar\")") xbutton("N_NMDAR","makePointBrowser(\"N_NMDAR\")") xbutton("NMDAR","makePointBrowser(\"NMDAR\")") xbutton("AMPAR","makePointBrowser(\"AMPAR\")") xbutton("modulator","makePointBrowser(\"modulator\")") xbutton("dAMPA_R","makePointBrowser(\"dAMPA_R\")") xbutton("inhbgaba","makePointBrowser(\"inhbgaba\")") xbutton("glutamate","makePointBrowser(\"glutamate\")") xbutton("AlphaI","makePointBrowser(\"AlphaI\")") xmenu() xmenu() xmenu() xmenu("Distributed Mechanisms") xmenu("Managers") xbutton("Inserter","load_template(\"Inserter\") makeinserter()") xbutton("Homogeneous Spec","load_proc(\"makeshowmechanism\") makeshowmechanism()") xmenu() xmenu("Viewers") xbutton("Shape Name","load_template(\"MenuExplore\") makeMenuExplore()") xbutton("Name Values","nrnallsectionmenu()") xmenu("Mechanisms (Globals)") xbutton("na_ion","nrnglobalmechmenu(\"na_ion\")") xbutton("k_ion","nrnglobalmechmenu(\"k_ion\")") xbutton("hh","nrnglobalmechmenu(\"hh\")") xbutton("ca_ion","nrnglobalmechmenu(\"ca_ion\")") xmenu() xmenu() xmenu() xmenu("Miscellaneous") xmenu("Clipboard") xbutton("Save to File","load_proc(\"clipboard_save\") clipboard_save()") xbutton("Retrieve from File","load_proc(\"clipboard_retrieve\") clipboard_retrieve()") xbutton("Gather Values","load_template(\"GatherVec\") makeGatherVec()") xbutton("Vector Play","load_template(\"VectorPlay\") makeVectorPlay()") xbutton("Vector Wrapper","load_template(\"VecWrap\") makeVecWrap()") xmenu() xmenu("Family") xbutton("Family","load_template(\"Family\") makeFamily()") xbutton("Command","load_template(\"ExecCommand\") newcommand()") xmenu() xbutton("Parameterized Function","load_template(\"FunctionFitter\") makefitter()") xbutton("Run Fitter","load_template(\"RunFitter\") makerunfitter()") xmenu("Impedance") xbutton("Frequency","load_template(\"ImpedanceRatio\") makeImpRatio()") xbutton("Path","load_template(\"Impx\") makeImpx()") xbutton("log(A) vs x","load_template(\"LogAvsX\") makelogax()") xbutton("Shape","load_template(\"ImpShape\") makeImpShape()") xmenu() xmenu() xpanel(7,160) } { save_window_ = new Graph(0) save_window_.size(0,2000,-80,40) scene_vector_[2] = save_window_ {save_window_.view(0, -80, 2000, 120, 656, 397, 581.76, 121.6)} save_window_.size(0,2000,-80,40) graphList[0].append(save_window_) save_window_.save_name("graphList[0].") save_window_.addexpr("v(.5)", 1, 1, 0.8, 0.9, 2) } { save_window_ = new Graph(0) save_window_.size(0,2000,0,1) scene_vector_[3] = save_window_ {save_window_.view(0, 0, 2000, 1, 656, 582, 586.56, 102.4)} save_window_.size(0,2000,0,1) graphList[2].append(save_window_) save_window_.save_name("graphList[2].") save_window_.addexpr("glu_glutamate", 1, 1, 0.8, 0.9, 2) } { xpanel("RunControl", 0) xcheckbox("Use CVode",&using_cvode_,"cvode_active(using_cvode_)") v_init = -65 xvalue("Init","v_init", 1,"stdinit()", 1, 1 ) xbutton("Init & Run","run()") xbutton("Stop","stoprun=1") runStopAt = 5 xvalue("Continue til","runStopAt", 1,"{continuerun(runStopAt) stoprun=1}", 1, 1 ) runStopIn = 1 xvalue("Continue for","runStopIn", 1,"{continuerun(t + runStopIn) stoprun=1}", 1, 1 ) xbutton("Single Step","steprun()") t = 2000 xvalue("t","t", 2 ) tstop = 2000 xvalue("Tstop","tstop", 1,"tstop_changed()", 0, 1 ) dt = 0.025 xvalue("dt","dt", 1,"setdt()", 0, 1 ) steps_per_ms = 1 xvalue("Points plotted/ms","steps_per_ms", 1,"setdt()", 0, 1 ) xpanel(11,451) } {ocbox_ = new VBox() ocbox_list_.prepend(ocbox_) ocbox_.intercept(1)} { xpanel("", 0) GMAXN = 0.03 xvalue("NMDA Gmax","GMAXN", 1,"set_nmda()", 0, 0 ) A = 5 xvalue("Rb2","A", 1,"set_nmda()", 0, 0 ) B = 6.7 xvalue("Ru","B", 1,"set_nmda()", 0, 0 ) C = 15.2 xvalue("Rd","C", 1,"set_nmda()", 0, 0 ) D = 9.4 xvalue("Rr","D", 1,"set_nmda()", 0, 0 ) E = 83.8 xvalue("Ro","E", 1,"set_nmda()", 0, 0 ) F = 83.8 xvalue("Rc","F", 1,"set_nmda()", 0, 0 ) Magnesium = 0.5 xvalue("Mg","Magnesium", 1,"set_nmda()", 0, 0 ) xpanel() } {ocbox_ = ocbox_list_.object(0) ocbox_.intercept(0) ocbox_.map("nrn4", 388, -4, 240, 252.48)} objref ocbox_ {ocbox_ = new VBox() ocbox_list_.prepend(ocbox_) ocbox_.intercept(1)} { xpanel("", 0) GMAX = 0.05 xvalue("dAMPA Gmax","GMAX", 1,"set_dampa()", 0, 0 ) RBD = 0.4 xvalue("RBd","RBD", 1,"set_dampa()", 0, 0 ) RB2D = 5e-05 xvalue("RB2d","RB2D", 1,"set_dampa()", 0, 0 ) RBDR = 0.03 xvalue("RBDr","RBDR", 1,"set_dampa()", 0, 0 ) RB2DR = 0.0002 xvalue("RB2Dr","RB2DR", 1,"set_dampa()", 0, 0 ) RBB = 0.004 xvalue("RBb","RBB", 1,"set_dampa()", 0, 0 ) xpanel() } {ocbox_ = ocbox_list_.object(0) ocbox_.intercept(0) ocbox_.map("nrn4", 374, 286, 247.68, 197.76)} objref ocbox_ { xpanel("VClamp[0] at soma(0.5)", 0) xlabel("VClamp[0] at soma(0.5)") Vclamp.dur[0] = 2000 xvalue("dur[0]","Vclamp.dur[0]", 1,"", 0, 1 ) Vclamp.dur[1] = 0 xvalue("dur[1]","Vclamp.dur[1]", 1,"", 0, 1 ) Vclamp.dur[2] = 0 xvalue("dur[2]","Vclamp.dur[2]", 1,"", 0, 1 ) Vclamp.amp[0] = 40 xvalue("amp[0]","Vclamp.amp[0]", 1,"", 0, 1 ) Vclamp.amp[1] = 0 xvalue("amp[1]","Vclamp.amp[1]", 1,"", 0, 1 ) Vclamp.amp[2] = 0 xvalue("amp[2]","Vclamp.amp[2]", 1,"", 0, 1 ) Vclamp.gain = 100000 xvalue("gain","Vclamp.gain", 1,"", 0, 1 ) Vclamp.rstim = 1 xvalue("rstim","Vclamp.rstim", 1,"", 0, 1 ) Vclamp.tau1 = 0.001 xvalue("tau1","Vclamp.tau1", 1,"", 0, 1 ) Vclamp.tau2 = 0 xvalue("tau2","Vclamp.tau2", 1,"", 0, 1 ) Vclamp.e0 = -0.00040029 xvalue("e0","Vclamp.e0", 1,"", 0, 1 ) Vclamp.vo0 = 40.029 xvalue("vo0","Vclamp.vo0", 1,"", 0, 1 ) Vclamp.vi0 = 39.999 xvalue("vi0","Vclamp.vi0", 1,"", 0, 1 ) Vclamp.fac = 0 xvalue("fac","Vclamp.fac", 1,"", 0, 1 ) Vclamp.i = 0.0294529 xvalue("i","Vclamp.i", 0,"", 0, 1 ) Vclamp.e = -0.000400287 xvalue("e","Vclamp.e", 0,"", 0, 1 ) Vclamp.vo = 40.0287 xvalue("vo","Vclamp.vo", 0,"", 0, 1 ) Vclamp.vi = 39.9992 xvalue("vi","Vclamp.vi", 0,"", 0, 1 ) xpanel(358,450) } { load_template("Family")} { ocbox_ = new Family(0) } {object_push(ocbox_)} { xstart=-80 xend=40 nstep=7 setval() build() variable = "VClamp[0].amp[0]" generator = "run()" } {object_pop()} { ocbox_ = ocbox_.box ocbox_.map("nrn4", 714, 696, 242.88, 250.56)} objref ocbox_ { save_window_ = new Graph(0) save_window_.size(0,2000,0,0.1) scene_vector_[4] = save_window_ {save_window_.view(0, 0, 2000, 0.1, 655, -4, 577.92, 341.44)} save_window_.size(0,2000,-1,1) graphList[1].append(save_window_) save_window_.save_name("graphList[1].") save_window_.addvar("VClamp[0].i", 1, 1, 0.8, 0.9, 2) } objectvar scene_vector_[1] {doNotify()}